Voluba User Documentation
volumetric brain anchoring
Useful info
- report a bug: inm1-bda@fz-juelich.de
- production instance: https://voluba.apps.hbp.eu
- develop instance: https://voluba-next.apps-dev.hbp.eu
- user documentation: https://voluba-user-doc.apps-dev.hbp.eu/
Before starting
You will need an ORCID or HBP OIDC account if you would like to upload and anchor your own nifti volume.
Getting started
- navigate to https://voluba.apps.hbp.eu or https://voluba-next.apps-dev.hbp.eu
- Either:
-
Selected a public volume
-
Upload and/or select a private volume
-
Click Start to start the volumetric anchoring workflow
Coarse alignment (Optional)
Fine aligment
Fine alignment can be achieved by adding corresponding landmarks on incoming and reference landmarks.
Overlay mode
Parallel mode
Parallel mode can be toggled via the two panel mode button on top right corner.
Adding landmark in reference template
Adding landmark in incoming volume
Calculate linear transformation
When three or more landmark pairs have been added Compute and display transform based on landmarks Computes the linear transformation of volume and applies it to the incoming volume